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It also offers the facility to generate figures for publication and to design primers for bisulphite-treated templates. Highlights: Supports both raw or base called data Generates a bisulfite converted reference sequence from a non-converted input and identifies CpG's Batches a large number of files, and assembles the data Methylation specific visualization Intended Users: Anyone who works with DNA methylation data from bisulfite sequencing; occasional users as well as experts DNA Methylation Analysis, Bisulfite Sequencing (Max Planck Institute for Computer Science) BiQ Analyzer is a free software tool for easy visualization and quality control of DNA methylation data from bisulfite sequencing. Highlights: End-to-end support of the analysis process: from raw sequence files to comprehensive documentation and visualization Automatical generation of publication-quality 'lollipop diagrams' Integrated 1-click multiple sequence alignment Automated CpG highlighting Factor 5 speedup over manual analysis, plus systematic quality control Intended Users: Anyone who works with DNA methylation data from bisulfite sequencing; occasional users as well as experts (beginners will benefit from help with quality control whereas experts will save hours and days of tedious work by using BiQ Analyzer). Web-based Diagram Generation: Diagram generation is also available as a for users who analyze their DNA methylation data outside BiQ Analyzer but want to generate high-quality 'lollipop diagrams' directly. Applied Biosystems. All rights reserved. GeneMapper Software has not undergone specific developmental validation for human identification. GeneMapper® Software is a flexible, high-performance genotyping software package that provides quality allele calls for all Applied Biosystems. Using ABI PRISM. DNA Sequencing, Fragment Analysis, Genotyping, Data Management, LIMS (Geospiza) Commercial Off-the-shelf software for genetic testing for contract core labs, life science research labs, molecular diagnostic labs and bio-therapeutic manufacturing labs to manage and automate the production and analysis of genetic data. The Genetic Analysis Integration Tool links the Finch Suite LIMS with the Applied Biosystems GeneMapper® Software v4.0 and SeqScape® v2.5 software applications. Genotyping (Sapio Sciences LLC) Advanced genetic analysis tool for modeling the genetic roots of disease. Exempler includes: ABI File Import Wizard: Import GeneMapper® data. Supports ABI's hCV naming convention as well as RS'id SNP identifiers. Complete Statistical Analysis: Calculate statistics such as QLT, TDT (family based), LD, Chi Square, Fishers, Odds Ratio LOH, and Haplotype analysis (EM algorithm) for association studies. Gene Ontology Module: Map significant SNP's to their related ontological information in support of functional genomics research. Genetic Algorithm Module: Discover multi-loci models that correspond with phenotypes. Extensive Annotations: Includes DbSNP, Human Gene and Gene Ontology. Automatic calculation of related genes based on user definable SNP-to-gene base pair distance. Resequencing, MLPA, HLA typing (JSI Medical Systems) Sequencing: Patient-based mutation detection, easily configurable for any gene, high degree automation and security for high-throughput DNA sequencing. HLA: Sequencing-based typing (SBT) for HLA with generic and allele specific result calculation in different resolutions (2-digit and 4-digit, maximum resolution). 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